mcode plugin Search Results


mcode 2.0 plugin  (KCore Analytics)
90
KCore Analytics mcode 2.0 plugin
Mcode 2.0 Plugin, supplied by KCore Analytics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/mcode 2.0 plugin/product/KCore Analytics
Average 90 stars, based on 1 article reviews
mcode 2.0 plugin - by Bioz Stars, 2026-05
90/100 stars
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mcode plugin app  (SourceForge net)
90
SourceForge net mcode plugin app
Identification of gene modules related to pyroptosis via comprehensive analysis of PPI network and WGCNA. A PPI network was constructed using the STRING database. B PPI network was visualized using Cytoscape software and the relevance level were ranked in different colors. C Twenty-one hub genes and their connections were identified via the <t>MCODE</t> algorithm. D Determination of WGCNA soft threshold. E Gene clustering tree (dendrogram) was obtained by hierarchical clustering of adjacency-based dissimilarity. F The correlation heatmap of gene modules and phenotypes. G The venn diagram showed the genes shared by PPI hub genes and the WGCNA magenta module
Mcode Plugin App, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/mcode plugin app/product/SourceForge net
Average 90 stars, based on 1 article reviews
mcode plugin app - by Bioz Stars, 2026-05
90/100 stars
  Buy from Supplier
allegromcode plugin  (AllegroViva Corporation)
90
AllegroViva Corporation allegromcode plugin
Identification of gene modules related to pyroptosis via comprehensive analysis of PPI network and WGCNA. A PPI network was constructed using the STRING database. B PPI network was visualized using Cytoscape software and the relevance level were ranked in different colors. C Twenty-one hub genes and their connections were identified via the <t>MCODE</t> algorithm. D Determination of WGCNA soft threshold. E Gene clustering tree (dendrogram) was obtained by hierarchical clustering of adjacency-based dissimilarity. F The correlation heatmap of gene modules and phenotypes. G The venn diagram showed the genes shared by PPI hub genes and the WGCNA magenta module
Allegromcode Plugin, supplied by AllegroViva Corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/allegromcode plugin/product/AllegroViva Corporation
Average 90 stars, based on 1 article reviews
allegromcode plugin - by Bioz Stars, 2026-05
90/100 stars
  Buy from Supplier
mcode plugin  (Cytos Inc)
90
Cytos Inc mcode plugin
Identification of gene modules related to pyroptosis via comprehensive analysis of PPI network and WGCNA. A PPI network was constructed using the STRING database. B PPI network was visualized using Cytoscape software and the relevance level were ranked in different colors. C Twenty-one hub genes and their connections were identified via the <t>MCODE</t> algorithm. D Determination of WGCNA soft threshold. E Gene clustering tree (dendrogram) was obtained by hierarchical clustering of adjacency-based dissimilarity. F The correlation heatmap of gene modules and phenotypes. G The venn diagram showed the genes shared by PPI hub genes and the WGCNA magenta module
Mcode Plugin, supplied by Cytos Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/mcode plugin/product/Cytos Inc
Average 90 stars, based on 1 article reviews
mcode plugin - by Bioz Stars, 2026-05
90/100 stars
  Buy from Supplier

Image Search Results


Identification of gene modules related to pyroptosis via comprehensive analysis of PPI network and WGCNA. A PPI network was constructed using the STRING database. B PPI network was visualized using Cytoscape software and the relevance level were ranked in different colors. C Twenty-one hub genes and their connections were identified via the MCODE algorithm. D Determination of WGCNA soft threshold. E Gene clustering tree (dendrogram) was obtained by hierarchical clustering of adjacency-based dissimilarity. F The correlation heatmap of gene modules and phenotypes. G The venn diagram showed the genes shared by PPI hub genes and the WGCNA magenta module

Journal: Journal of Translational Medicine

Article Title: Transcriptome profile and immune infiltrated landscape revealed a novel role of γδT cells in mediating pyroptosis in celiac disease

doi: 10.1186/s12967-023-04359-1

Figure Lengend Snippet: Identification of gene modules related to pyroptosis via comprehensive analysis of PPI network and WGCNA. A PPI network was constructed using the STRING database. B PPI network was visualized using Cytoscape software and the relevance level were ranked in different colors. C Twenty-one hub genes and their connections were identified via the MCODE algorithm. D Determination of WGCNA soft threshold. E Gene clustering tree (dendrogram) was obtained by hierarchical clustering of adjacency-based dissimilarity. F The correlation heatmap of gene modules and phenotypes. G The venn diagram showed the genes shared by PPI hub genes and the WGCNA magenta module

Article Snippet: Furthermore, we used the MCODE plugin app ( https://sourceforge.net/projects/mcode/ ) within Cytoscape to identify hub genes and calculate the degrees of interaction between DEGs to visualize the ranking.

Techniques: Construct, Software